Table 2 List of Rwui resources and documentation, required external resources and useful external resources

Rwui resources and documentation

Rwui

http://sysbio.mrc-bsu.cam.ac.uk/Rwui

Documentation: Rwui

http://sysbio.mrc-bsu.cam.ac.uk/Rwui/tutorial/Instructions.html

Step-by-step guide: Basic webapp

http://sysbio.mrc-bsu.cam.ac.uk/Rwui/tutorial/quick_tour.html

Documentation: Displaying dynamic maps

http://sysbio.mrc-bsu.cam.ac.uk/Rwui/tutorial/dynamic_map_tutorial/dynmap_docs/index.html

Step-by-step guides: Dynamic map webapp

http://sysbio.mrc-bsu.cam.ac.uk/Rwui/tutorial/dynamic_map_tutorial/dynmap_step_by_step/index.html

R functions: creating dynamic map javascript

http://sysbio.mrc-bsu.cam.ac.uk/Rwui/tutorial/dynamic_map_tutorial/dynmap_functions.R

Documentation: R functions

http://sysbio.mrc-bsu.cam.ac.uk/Rwui/tutorial/dynamic_map_tutorial/dynmap_functions_docs/index.html

Example app: Simple

http://sysbio.mrc-bsu.cam.ac.uk/dynmap_simple_example

R code: Simple app

http://sysbio.mrc-bsu.cam.ac.uk/Rwui/tutorial/dynamic_map_tutorial/dynmap_simple_example.R

Example app: Meuse

http://sysbio.mrc-bsu.cam.ac.uk/dynmap_example

R code: Meuse app

http://sysbio.mrc-bsu.cam.ac.uk/Rwui/tutorial/dynamic_map_tutorial/dynmap_example.R

Example app: Malawi

http://sysbio.mrc-bsu.cam.ac.uk/click_dynmap_example

R code: Malawi app

http://sysbio.mrc-bsu.cam.ac.uk/Rwui/tutorial/dynamic_map_tutorial/click_dynmap_example.R

R code: preprocessing population data

http://sysbio.mrc-bsu.cam.ac.uk/Rwui/tutorial/dynamic_map_tutorial/preprocess.R

External resources required

Tomcat

http://tomcat.apache.org/

Java

http://www.oracle.com/technetwork/java/javase/downloads/index.html

Google Maps API key

https://developers.google.com/maps/documentation/javascript/tutorial#api_key

ProjectedOverlay

http://code.google.com/p/geoxml3/source/browse/trunk/ProjectedOverlay.js

Useful external resources for managing projections

R packages: raster, sp, rgdal, geosphere, rsaga, proj4, rgeos, plotKML

http://cran.r-project.org/web/packages/

GDAL

http://www.gdal.org/

PROJ.4

http://trac.osgeo.org/proj/

GEOS

http://trac.osgeo.org/geos/

SAGA

http://www.saga-gis.org/en/index.html