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Table 1 Three statistical methods for detection of tuberculosis outbreaks, 2008-2009

From: Using statistical methods and genotyping to detect tuberculosis outbreaks

Method

Description

Geographic unit

Time period

Parameters for alert threshold

County-based LLR

(current TB GIMS method)

Measures difference between the observed and expected geospatial concentration of cases

County

2-year window and 3-year window

Currently designated in TB GIMS as a county-based LLR of ≥ 5

CUSUM

Calculates a monthly cumulative sum of variations between the observed and expected case counts; indicates an aberrant event above a threshold

County

Cumulative by month; 2-year moving window used to determine background rate

Threshold determined by background rate (based on 6th lowest case count among all 2 year windows), alternative rate (background rate + 3), null average run length (expect, on average, one false alarm every 100 months)

SaTScan

Applies spatial scan statistic to determine areas with significantly higher geospatial concentration of cases

None assumed; a circular area is flexibly determined by algorithm; cases aggregated by zip code

2-year window and 3-year window

P value to determine location of clusters (< 0.05) using maximum search radius of 20, 50, and 100 km for the circular scanning

  1. Definition of abbreviations: CUSUM = cumulative sums; LLR = log-likelihood ratio; TB GIMS = Tuberculosis Genotyping Information Management System.